Atheism is still a belief, thus it is owed just as much respect as any other beliefs.
This "War on God" is pretty ridiculous. It's not a war, its simply our society's natural progression into a more knowledgeable people. The ancient Greeks were pretty sure a heavenly chariot pulled the sun across the sky every day, but clearly that sounds crazy now that we know about how planets orbit the sun. The Catholic church once stated that the Earth was the center of the universe. Yeah, that wasn't even close. We claim infallibility in each of our religions when religions of the past have been thoroughly debunked.
The war on God is simply a product of our ability to explain what was once a mystery. The thought of God is being phased out not because we have no morals or faith, its more that we're following a natural progression of intelligent thought. We still have a foundation for ethical behavior that we're born with, remember that thread a few weeks ago with the video of babies being able to tell right from wrong? Those babies had no knowledge of God or religion, but they were born inherently good. So then it's possible to grow up with no knowledge of any God and still be a good person at heart.
Maybe as our intelligence grows so will our wisdom, which at the moment has not progressed as much. I consider the two to be very different. It's clearly not wise for us to be so divided when it comes to these issues, but we are. Maybe in 100 years we'll look back and say "damn, we were all really fucking dumb"
Although since the world is gonna end on Friday I guess we'll never find out.